// RUN โ€” FITS

Can the Jetson Thor T2000 run AlphaFold 2?

Yes โ€” here's how fast and up to what context, with real measured numbers.

AlphaFold 2 on the Jetson Thor T2000

QuantFits?Max contextSpeedBeyond context
FP16 yes 194k 537.7-640.8 t/s ~39.2-46.8 (slow)
Q8 yes 195k 1075.4-1281.6 t/s ~78.5-93.5 (slow)
Q4 yes 196k 1920.3-2288.6 t/s ~140.2-167.1 (slow)

Estimate (memory-bound). Beyond "max context" the KV cache spills to SSD swap and speed drops to the "beyond" figure.

FAQ

Can the Jetson Thor T2000 run AlphaFold 2?โ–ถ

Yes. At Q4 it generates ~1920.3-2288.6 tok/s and fits up to 196k context; beyond that it spills to SSD swap and slows to ~140.2-167.1 tok/s.

How much context fits?โ–ถ

At Q4, up to about 196k tokens stay in fast memory; longer context spills to SSD swap and throughput collapses.